SNP Profiles matching PNG 218

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CC	AG	CC	TT	TT	CT	GT	CC	CT	AA	AG	CT	AG	CT
1._PNG_218	CC	AG	CC	TT	TT	CT	GT	CC	CT	AA	AG	CT	AG	CT
2._PNG_218	CC	AG	CC	TT	TT	CT	GT	CC	CT	AA	AG	CT	AG	CT
3._PNG_218	CC	AG	CC	TT	TT	CT	GT	CC	CT	AA	AG	CT	AG	CT
4._GC-01-108-6-05	CC	AG	CC	TT	TT	CT	GT	CC	CT	AA	AG	CT	AG	CT
5._GC-01-108-6-05	CC	AG	CC	TT	TT	CT	GT	CC	CT	AA	AG	CT	AG	CT
6._GC-01-108-6-05	CC	AG	CC	TT	TT	CT	GT	CC	CT	AA	AG	CT	AG	CT
7._GC-01-108-6-05	CC	AG	CC	TT	TT	CT	GT	CC	CT	AA	AG	CT	AG	CT
8._RUQ_1304	_	AG	CC	TT	_	_	GT	_	_	_	_	CT	AG	_

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	GG	TT	CC	CC	GG	AG	CT	CC	CG	TT	CC	CC	AA
1._PNG_218	AA	GG	TT	CC	CC	GG	AG	CT	CC	CG	TT	CC	CC	AA
2._PNG_218	AA	GG	TT	CC	CC	GG	AG	CT	CC	CG	TT	CC	CC	AA
3._PNG_218	AA	GG	TT	CC	CC	GG	AG	CT	CC	CG	TT	CC	CC	AA
4._GC-01-108-6-05	AA	GG	TT	CC	CC	GG	AG	CT	CC	CG	TT	CC	CC	AA
5._GC-01-108-6-05	AA	GG	TT	CC	CC	GG	AG	CT	CC	CG	TT	CC	CC	AA
6._GC-01-108-6-05	AA	GG	TT	CC	CC	GG	AG	CT	CC	CG	TT	CC	CC	AA
7._GC-01-108-6-05	AA	GG	TT	CC	CC	GG	AG	CT	CC	CG	TT	CC	CC	AA
8._RUQ_1304	_	_	_	CC	CC	GG	_	CT	CC	GG	TT	CC	CC	AA

	29	30	31	32	33	34	35	36	37	38	39
_Input profile	GG	AA	CT	AG	GG	AA	CC	GG	AA	TT	GG	X_X	X_X	X_X
1._PNG_218	GG	AA	CT	AG	GG	AA	CC	GG	AA	TT	GG	X_X	X_X	X_X
2._PNG_218	GG	AA	CT	AG	GG	AA	CC	GG	AA	TT	GG	X_X	X_X	X_X
3._PNG_218	GG	AA	CT	AG	GG	AA	CC	GG	AA	TT	GG	X_X	X_X	X_X
4._GC-01-108-6-05	GG	AA	CT	AG	GG	AA	CC	GG	AA	TT	GG	X_X	X_X	X_X
5._GC-01-108-6-05	GG	AA	CT	AG	GG	AA	CC	GG	AA	TT	GG	X_X	X_X	X_X
6._GC-01-108-6-05	GG	AA	CT	AG	GG	AA	CC	GG	AA	TT	GG	X_X	X_X	X_X
7._GC-01-108-6-05	GG	AA	CT	AG	GG	AA	CC	GG	AA	TT	GG	X_X	X_X	X_X
8._RUQ_1304	_	AA	CT	AG	GG	AA	CC	GG	AA	_	_	X_X	X_X	X_X

Input profile: PNG_218

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Mars Center for Cocoa Science, Brazil

Location: 1605 3

Dapeng Zhang, 2016

1._PNG_218

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1605 1

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

2._PNG_218

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1605 2

Dapeng Zhang, 2016

3._PNG_218

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1605 4

Dapeng Zhang, 2016

4._PNG_218 GC-01-108-6-05

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

5._PNG_218 GC-01-108-6-05

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

6._PNG_218 GC-01-108-6-05

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

7._PNG_218 GC-01-108-6-05

identical
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

8._PNG_340 RUQ_1304

97.9 %
24 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

Key to SNP Markers

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1270	7	TcSNP1253	8	TcSNP1165	9	TcSNP1144	10	TcSNP1075
11	TcSNP1062	12	TcSNP1060	13	TcSNP998	14	TcSNP994	15	TcSNP953
16	TcSNP929	17	TcSNP917	18	TcSNP891	19	TcSNP872	20	TcSNP723
21	TcSNP645	22	TcSNP619	23	TcSNP591	24	TcSNP577	25	TcSNP560
26	TcSNP534	27	TcSNP529	28	TcSNP469	29	TcSNP429	30	TcSNP372
31	TcSNP242	32	TcSNP230	33	TcSNP226	34	TcSNP193	35	TcSNP151
36	TcSNP150	37	TcSNP144	38	TcSNP32	39	TcSNP25